Location: SLC transporters @ d36dca3e6ed8 / Electrogenic cotransporter / params_BG.cellml

Author:
Weiwei Ai <wai484@aucklanduni.ac.nz>
Date:
2024-04-08 18:20:16+12:00
Desc:
clean up; correct the cell volume to 0.09 pL; remove the param convertion equations in cellml; use python to do the conversion;
Permanent Source URI:
http://models.cellml.org/workspace/b65/rawfile/d36dca3e6ed80f08a478e14a9be7695786950d7e/Electrogenic cotransporter/params_BG.cellml

<?xml version='1.0' encoding='UTF-8'?>
<model name="params_BG" xmlns="http://www.cellml.org/cellml/1.1#" xmlns:cellml="http://www.cellml.org/cellml/1.1#" xmlns:xlink="http://www.w3.org/1999/xlink">
    <import xlink:href="./units.cellml">
        <units name="fmol_per_s" units_ref="fmol_per_s"/>
        <units name="fmol" units_ref="fmol"/>
        <units name="per_fmol" units_ref="per_fmol"/>
        <units name="C_per_mol" units_ref="C_per_mol"/>
        <units name="J_per_K_mol" units_ref="J_per_K_mol"/>
    </import>
    <component name="params_BG">
        <variable initial_value="8.31" name="R" public_interface="out" units="J_per_K_mol"/>
        <variable initial_value="293" name="T" public_interface="out" units="kelvin"/>
        <variable initial_value="96485" name="F" public_interface="out" units="C_per_mol"/>
        <variable initial_value="1" name="K_Nai" public_interface="out" units="per_fmol"/>
        <variable initial_value="1" name="q_init_Nai" public_interface="out" units="fmol"/>
        <variable initial_value="1" name="K_Nao" public_interface="out" units="per_fmol"/>
        <variable initial_value="1" name="q_init_Nao" public_interface="out" units="fmol"/>
        <variable initial_value="1" name="K_Glci" public_interface="out" units="per_fmol"/>
        <variable initial_value="1" name="q_init_Glci" public_interface="out" units="fmol"/>
        <variable initial_value="1" name="K_Glco" public_interface="out" units="per_fmol"/>
        <variable initial_value="1" name="q_init_Glco" public_interface="out" units="fmol"/>
        <variable initial_value="1" name="K_1" public_interface="out" units="per_fmol"/>
        <variable initial_value="1" name="q_init_1" public_interface="out" units="fmol"/>
        <variable initial_value="1" name="K_2" public_interface="out" units="per_fmol"/>
        <variable initial_value="1" name="q_init_2" public_interface="out" units="fmol"/>
        <variable initial_value="1" name="K_3" public_interface="out" units="per_fmol"/>
        <variable initial_value="1" name="q_init_3" public_interface="out" units="fmol"/>
        <variable initial_value="1" name="K_4" public_interface="out" units="per_fmol"/>
        <variable initial_value="1" name="q_init_4" public_interface="out" units="fmol"/>
        <variable initial_value="1" name="K_5" public_interface="out" units="per_fmol"/>
        <variable initial_value="1" name="q_init_5" public_interface="out" units="fmol"/>
        <variable initial_value="1" name="K_6" public_interface="out" units="per_fmol"/>
        <variable initial_value="1" name="q_init_6" public_interface="out" units="fmol"/>
        <variable initial_value="0" name="V0_Vm" public_interface="out" units="volt"/>
        <variable initial_value="1" name="z_z1" public_interface="out" units="dimensionless"/>
        <variable initial_value="1" name="z_z2" public_interface="out" units="dimensionless"/>
        <variable initial_value="1" name="z_z3" public_interface="out" units="dimensionless"/>
        <variable initial_value="1" name="z_z4" public_interface="out" units="dimensionless"/>
        <variable initial_value="1" name="kappa_r1" public_interface="out" units="fmol_per_s"/>
        <variable initial_value="1" name="kappa_r2" public_interface="out" units="fmol_per_s"/>
        <variable initial_value="1" name="kappa_r3" public_interface="out" units="fmol_per_s"/>
        <variable initial_value="1" name="kappa_r4" public_interface="out" units="fmol_per_s"/>
        <variable initial_value="1" name="kappa_r5" public_interface="out" units="fmol_per_s"/>
        <variable initial_value="1" name="kappa_r6" public_interface="out" units="fmol_per_s"/>
        <variable initial_value="1" name="kappa_r7" public_interface="out" units="fmol_per_s"/>
    </component>
</model>